Articles in mostly peer-reviewed Journals
Izumi Ishigami, Sergio Carbajo, Nadia Zatsepin, Masahide Hikita, Chelsie E Conrad, Garrett Nelson, Jesse Coe, Shibom Basu, Thomas Grant, Matthew H Seaberg, Raymond G Sierra, Mark S Hunter, Petra Fromme, Raimund Fromme, Denis L Rousseau, Syun-Ru Yeh J. Am. Chem. Soc. 2023,https://doi.org/10.1021/jacs.3c07803 Diandra Doppler, Mukul Sonker, Ana Egatz-Gomez, Alice Grieco, Sahba Zaare, Rebecca Jernigan, Jose Domingo Meza-Aguilar, Mohammad T Rabbani, Abhik Manna, Roberto C Alvarez, Konstantinos Karpos, Jorvani Cruz Villarreal, Garrett Nelson, Jay-How Yang, Jackson Carrion, Katherine Morin, Gihan K Ketawala, Angel L Pey, Miguel Angel Ruiz-Fresneda, Juan Luis Pacheco-Garcia, Juan A Hermoso, Reza Nazari, Raymond Sierra, Mark S Hunter, Alexander Batyuk, Christopher J Kupitz, Robert E Sublett, Stella Lisova, Valerio Mariani, Sébastien Boutet, Raimund Fromme, Thomas D Grant, Sabine Botha, Petra Fromme, Richard A Kirian, Jose Manuel Martin-Garcia, Alexandra Ros Lab on a Chip 2023, 23,13,3016-3033, DOI: 10.1039/D3LC00176H69.Physachenolide C is a Potent, Selective BET Inhibitor
Christopher J Zerio, Jared Sivinski, EM Kithsiri Wijeratne, Ya-Ming Xu, Duc T Ngo, Andrew J Ambrose, Luis Villa-Celis, Niloofar Ghadirian, Michael W Clarkson, Donna D Zhang, Nancy C Horton, AA Leslie Gunatilaka, Raimund Fromme, Eli Chapman J. Med. Chem. 2023, 66, 1, 913–933, https://doi.org/10.1021/acs.jmedchem.2c0177068.Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser
Rebecca J Jernigan, Dhenugen Logeswaran, Diandra Doppler, Nirupa Nagaratnam, Mukul Sonker, Jay-How Yang, Gihan Ketawala, Jose M Martin-Garcia, Megan L Shelby, Thomas D Grant, Valerio Mariani, Alexandra Tolstikova, Michelle Z Sheikh, Mimi Cho Yung, Matthew A Coleman, Sahba Zaare, Emily K Kaschner, Mohammad Towshif Rabbani, Reza Nazari, Michele A Zacks, Brandon Hayes, Raymond G Sierra, Mark S Hunter, Stella Lisova, Alexander Batyuk, Christopher Kupitz, Sebastien Boutet, Debra T Hansen, Richard A Kirian, Marius Schmidt, Raimund Fromme, Matthias Frank, Alexandra Ros, Julian J-L Chen, Sabine Botha, Petra Fromme Structure10.January 2023 https://doi.org/10.1016/j.str.2022.12.00967.Design of novel cyanovirin-N variants by modulation of binding dynamics through distal mutations
I Can Kazan, Prerna Sharma, Mohammad Imtiazur Rahman, Andrey Bobkov, Raimund Fromme, Giovanna Ghirlanda , S Banu Ozkan eLife 2022;11:e67474. DOI: https://doi.org/10.7554/eLife.6747466. Electrically stimulated droplet injector for reduced sample consumption in serial crystallography
Mukul Sonker, Diandra Doppler, Ana Egatz-Gomez, Sahba Zaare, Mohammad T Rabbani, Abhik Manna, Jorvani Cruz Villarreal, Garrett Nelson, Gihan K Ketawala, Konstantinos Karpos, Roberto C Alvarez, Reza Nazari, Darren Thifault, Rebecca Jernigan, Dominik Oberthür, Huijong Han, Raymond Sierra, Mark S Hunter, Alexander Batyuk, Christopher J Kupitz, Robert E Sublett, Frederic Poitevin, Stella Lisova, Valerio Mariani, Alexandra Tolstikova, Sebastien Boutet, Marc Messerschmidt, J Domingo Meza-Aguilar, Raimund Fromme , Jose M Martin-Garcia, Sabine Botha, Petra Fromme, Thomas D Grant, Richard A Kirian, Alexandra Ros Biophysical Reports(2022)Vol 2/4, 100081, https://doi.org/10.1016/j.bpr.2022.100081 Nirupa Nagaratnam, Jose M Martin-Garcia, Jay-How Yang, Matthew R Goode, Gihan Ketawala, Felicia M Craciunescu, James D Zook, Manashi Sonowal, Dewight Williams, Thomas D Grant, Raimund Fromme, Debra T Hansen, Petra Fromme PloS one(2022) Vol 17/8, e0267370,doi: 10.1371/journal.pone.026737064. Co-flow injection for serial crystallography at X-ray free-electron lasers
Diandra Doppler, Mohammad T. Rabbani, Romain Letrun, Jorvani Cruz Villarreal,Dai Hyun Kim, Sahir Gandhi, Ana Egatz-Gomez,Mukul Sonker,Joe Chen, Faisal H. M. Koua, Jayhow Yang, Mohamed Youssef, Victoria Mazalova, Saša Bajt, Megan L. Shelby, Matt A. Coleman, Max O. Wiedorn, Juraj Knoska, Silvan Schon, Tokushi Sato, Mark S. Hunter, Ahmad Hosseinizadeh, Christopher Kuptiz, Reza Nazari,Roberto C. Alvarez, Konstantinos Karpos, Sahba Zaare, Zachary Dobson, Erin Discianno,Shangji Zhang, James D. Zook, Johan Bielecki, Raphael de Wijn, Adam R. Round, Patrik Vagovic, Marco Kloos, Mohammad Vakili, Gihan K. Ketawala, Natasha E. Stander, Tien L. Olson, Katherine Morin, Jyotirmory Mondal, Jonathan Nguyen, Jose Domingo Meza-Aguilar, Gerdenis Kodis, Sara Vaiana, Jose M. MartinGarcia, Valerio Mariani, Peter Schwander, Marius Schmidt, Marc Messerschmidt, Abbas Ourmazd, Nadia Zatsepin, Uwe Weierstall, Barry D. Bruce, Adrian P. Mancuso, Thomas Grant, Anton Barty, Henry N. Chapman, Matthias Frank, Raimund Fromme, John C. H. Spence, Sabine Botha, Petra Fromme, Richard A. Kirian and Alexandra Ros J. Appl. Cryst. (2022). 55, 1–1363. Segmented flow generator for serial crystallography at the European X-ray free electron laser
Austin Echelmeier, Jorvani Cruz Villarreal, Marc Messerschmidt, Daihyun Kim, Jesse D. Coe, Darren Thifault, Sabine Botha, Ana Egatz-Gomez, Sahir Gandhi, Gerrit Brehm, Chelsie E. Conrad, Debra T. Hansen, Caleb Madsen, Saša Bajt, J. Domingo Meza-Aguilar, Dominik Oberthür, Max O. Wiedorn, Holger Fleckenstein, Derek Mendez, Juraj Knoška, Jose M. Martin-Garcia, Hao Hu, Stella Lisova, Aschkan Allahgholi, Yaroslav Gevorkov, Kartik Ayyer, Steve Aplin, Helen Mary Ginn, Heinz Graafsma, Andrew J. Morgan, Dominic Greiffenberg, Alexander Klujev, Torsten Laurus, Jennifer Poehlsen, Ulrich Trunk, Davide Mezza, Bernd Schmidt, Manuela Kuhn, Raimund Fromme, Jolanta Sztuk-Dambietz, Natascha Raab, Steffen Hauf, Alessandro Silenzi, Thomas Michelat, Chen Xu, Cyril Danilevski, Andrea Parenti, Leonce Mekinda, Britta Weinhausen, Grant Mills, Patrik Vagovic, Yoonhee Kim, Henry Kirkwood, Richard Bean, Johan Bielecki, Stephan Stern, Klaus Giewekemeyer, Adam R. Round, Joachim Schulz, Katerina Dörner, Thomas D. Grant, Valerio Mariani, Anton Barty, Adrian P. Mancuso, Uwe Weierstall, John C. H. Spence, Henry N. Chapman, Nadia Zatsepin, Petra Fromme, Richard A. Kirian & Alexandra Ros Nature communications11, Article number: 4511 (2020) Shibom Basu , Petra Fromme & Raimund Fromme Book: Structural Biology in Drug Discovery: Methods, Techniques, and Practices Publisher: John Wiley & Sons, Inc.,633-647, 02 January 2020https://doi.org/10.1002/9781118681121.ch27 Karol Nass, Lars Redecke, Markus Perbandt, O Yefanov, M Klinge, R Koopmann, F Stellato, A Gabdulkhakov, R Schönherr, D Rehders, JM Lahey-Rudolph, A Aquila, A Barty, S Basu, RB Doak, R Duden, M Frank, R Fromme, Stephan Kassemeyer, G Katona, R Kirian, H Liu, I Majoul, JM Martin-Garcia, M Messerschmidt, Robert L Shoeman, U Weierstall, S Westenhoff, TA White, GJ Williams, CH Yoon, N Zatsepin, P Fromme, M Duszenko, HN Chapman, C Betzel Nature communications 11 (1), 1-13 (2020)60. Time-resolved serial femtosecond crystallography at the European XFEL
Suraj Pandey, Richard Bean, Tokushi Sato, Ishwor Poudya, Johan Bielecki, Jorvani Cruz Villarreal , Oleksandr Yefanov, Valerio Mariani, Thomas A. White , Christopher Kupitz, Mark Hunter, Mohamed H. Abdellatif , Saša Bajt , Valerii Bondar, Austin Echelmeier , Diandra Doppler, Moritz Emons, Matthias Frank , Raimund Fromme , Yaroslav Gevorkov , Gabriele Giovanetti , Man Jiang, Daihyun Kim, Yoonhee Kim, Henry Kirkwood , Anna Klimovskaia, Juraj Knoska, Faisal H. M. Koua, Romain Letrun , Stella Lisova, Luis Maia, Victoria Mazalova , Domingo Meza, Thomas Michelat , Abbas Ourmazd , Guido Palmer, Marco Ramilli, Robin Schubert , Peter Schwander, Alessandro Silenzi, Jolanta Sztuk-Dambietz, Alexandra Tolstikova, Henry N. Chapman , Alexandra Ros , Anton Barty, Petra Fromme, Adrian P. Mancuso and Marius Schmidt Nature Methods 2019 Nov 18. doi: 10.1038/s41592-019-0628-z.59. Membrane protein megahertz crystallography at the European XFEL
Gisriel C, Coe J, Letrun R, Yefanov OM, Luna-Chavez C, Stander NE, Lisova S, Mariani V, Kuhn M, Aplin S, Grant TD, Dörner K, Sato T, Echelmeier A, Cruz Villarreal J, Hunter MS, Wiedorn MO, Knoska J, Mazalova V, Roy-Chowdhury S, Yang JH, Jones A, Bean R, Bielecki J, Kim Y, Mills G, Weinhausen B, Meza JD, Al-Qudami N, Bajt S, Brehm G, Botha S, Boukhelef D, Brockhauser S, Bruce BD, Coleman MA, Danilevski C, Discianno E, Dobson Z, Fangohr H, Martin-Garcia JM, Gevorkov Y, Hauf S, Hosseinizadeh A, Januschek F, Ketawala GK, Kupitz C, Maia L, Manetti M, Messerschmidt M, Michelat T, Mondal J, Ourmazd A, Previtali G, Sarrou I, Schön S, Schwander P, Shelby ML, Silenzi A, Sztuk-Dambietz J, Szuba J, Turcato M, White TA, Wrona K, Xu C, Abdellatif M, Zook JD, Spence JCH, Chapman HN, Barty A, Kirian RA, Frank M, Ros A, Schmidt M, Fromme R, Mancuso AP, Fromme P, Zatsepin NA Nature Communications 2019 Nov 4;10(1):5021 doi: 10.1038/s41467-019-12955-358. Snapshot of an oxygen intermediate in the catalytic reaction of cytochrome c oxidase
Izumi Ishigami, Ariel Lewis-Ballester, Austin Echelmeier, Gerrit Brehm, Nadia A. Zatsepin, Thomas D. Grant, Jesse D. Coe, Stella Lisova, Garrett Nelson, Shangji Zhang, Zachary F. Dobson, Sébastien Boutet, Raymond G. Sierra, Alexander Batyuk, Petra Fromme, Raimund Fromme, John C. H. Spence, Alexandra Ros, Syun-Ru Yeh, Denis L. Rousseau Proceedings of the National Academy of Sciences Feb 2019, 201814526; DOI: 10.1073/pnas.1814526116 Scott Jensen, Brendan T Sullivan, Daniel A Hartzler, Jose Meza Aguilar, Salah Awel, Sasa Bajt, Shibom Basu, Richard Bean, Henry Chapman, Chelsie Conrad, Matthias Frank, Raimund Fromme, Jose M Martin-Garcia, Thomas D Grant, Michael Heymann, Mark S Hunter, Gihan Ketawala, Richard Adam Kirian, Juraj Knoska, Christopher Kupitz, Xuanxuan Li, Mengning Liang, Stella Lisova, Valerio Mariani, Victoria Leonidovna Mazalova, Marc Messerschmidt, Michael Moran, Garrett Nelson, Dominik Oberthuer, Alex Schaffer, Raymond G Sierra, Natalie Vaughn, Uwe Weierstall, Max O Wiedorn, P Lourdu Xavier, Jay-How Yang, Oleksandr Yefanov, Nadia Zatsepin, Andrew L Aquila, Petra Fromme, Sebastien Boutet, Gerald T Seidler, Yulia N Pushkar The Journal of Physical Chemistry Letters DOI: 10.1021/acs.jpclett.8b03595 (Web): December 19, 201856. Free-electron laser data for multiple-particle fluctuation scattering analysis
Kanupriya Pande, Jeffrey J Donatelli, Erik Malmerberg, Lutz Foucar, Billy K Poon, Markus Sutter, Sabine Botha, Shibom Basu, R Bruce Doak, Katerina Dörner, Sascha W Epp, Lars Englert, Raimund Fromme, Elisabeth Hartmann, Robert Hartmann, Guenter Hauser, Johan Hattne, Ahmad Hosseinizadeh, Stephan Kassemeyer, Lukas Lomb, Sebastian F Carron Montero, Andreas Menzel, Daniel Rolles, Artem Rudenko, Marvin M Seibert, Raymond George Sierra, Peter Schwander, Abbas Ourmazd, Petra Fromme, Nicholas K Sauter, Michael Bogan, John Bozek, Christoph Bostedt, Ilme Schlichting, Cheryl A Kerfeld, Petrus H Zwart Scientific Data volume 5, Article number: 180201 (2018)55. Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography
Jose L Olmos, Suraj Pandey, Jose M Martin-Garcia, George Calvey, Andrea Katz, Juraj Knoska, Christopher Kupitz, Mark S Hunter, Mengning Liang, Dominik Oberthuer, Oleksandr Yefanov, Max Wiedorn, Michael Heyman, Mark Holl, Kanupriya Pande, Anton Barty, Mitchell D Miller, Stephan Stern, Shatabdi Roy-Chowdhury, Jesse Coe, Nirupa Nagaratnam, James Zook, Jacob Verburgt, Tyler Norwood, Ishwor Poudyal, David Xu, Jason Koglin, Matthew H Seaberg, Yun Zhao, Saša Bajt, Thomas Grant, Valerio Mariani, Garrett Nelson, Ganesh Subramanian, Euiyoung Bae, Raimund Fromme, Russell Fung, Peter Schwander, Matthias Frank, Thomas A White, Uwe Weierstall, Nadia Zatsepin, John Spence, Petra Fromme, Henry N Chapman, Lois Pollack, Lee Tremblay, Abbas Ourmazd, George N Phillips, Marius Schmidt BMC biology (2018)16 (1), 59 https://doi.org/10.1186/s12915-018-0524-554. Structure of a symmetric photosynthetic reaction center–photosystem
Christopher Gisriel, Iosifina Sarrou, Bryan Ferlez, John H Golbeck, Kevin E Redding, Raimund Fromme Science 27 Jul 2017:eaan5611 DOI: 10.1126/science.aan5611 Izumi Ishigami, Nadia A. Zatsepin, Masahide Hikita, Chelsie E. Conrad, Garrett Nelson, Jesse D. Coe, Shibom Basu, Thomas D. Grant, Matthew H. Seaberg, Raymond G. Sierra, Mark S. Hunter, Petra Fromme, Raimund Fromme, Syun-Ru Yeh, and Denis L. Rousseau PNAS Proc Natl Acad Sci U S A. 2017 Jul 25; 114(30): 8011–801652. Diffraction data of core-shell nanoparticles from an X-ray free electron laser
Xuanxuan Li, Chun-Ya Chiu, Hsiang-Ju Wang, Stephan Kassemeyer, Sabine Botha, Robert L. Shoeman, Robert M. Lawrence, Christopher Kupitz, Richard Kirian, Daniel James, Dingjie Wang, Garrett Nelson, Marc Messerschmidt, Sébastien Boutet, Garth J. Williams, Elisabeth Hartmann, Aliakbar Jafarpour, Lutz M. Foucar, Anton Barty, Henry Chapman, Mengning Liang, Andreas Menzel, Fenglin Wang, Shibom Basu, Raimund Fromme, R. Bruce Doak, Petra Fromme, Uwe Weierstall, Michael H. Huang, John C. H. Spence, Ilme Schlichting, Brenda G. Hogue and Haiguang Liu Sci Data 2017; 4: 170048.Published online 2017 Apr 11. doi: 10.1038/sdata.2017.48 Cornelius Gati, Dominik Oberthuer, Oleksandr Yefanov, Richard D. Bunker, Francesco Stellato, Elaine Chiu, Shin-Mei Yeh, Andrew Aquila, Shibom Basu, Richard Bean, Kenneth R. Beyerlein, Sabine Botha, Sébastien Boutet, Daniel P. DePonte, R. Bruce Doak, Raimund Fromme, Lorenzo Galli, Ingo Grotjohann, Daniel R. James, Christopher Kupitz, Lukas Lomb, Marc Messerschmidt, Karol Nass, Kimberly Rendek, Robert L. Shoeman, Dingjie Wang, Uwe Weierstall, Thomas A. White, Garth J. Williams, Nadia A. Zatsepin, Petra Fromme, John C. H. Spence, Kenneth N. Goldie, Johannes A. Jehle, Peter Metcalf, Anton Barty, and Henry N. Chapman, PNAS http://www.pnas.org/cgi/doi/10.1073/pnas.1609243114 Feb 15, 201750. Structural enzymology using X-ray free electron lasers
Christopher Kupitz, Jose L Olmos Jr, Mark Holl, Lee Tremblay, Kanupriya Pande, Suraj Pandey, Dominik Oberthür, Mark Hunter, Mengning Liang, Andrew Aquila, Jason Tenboer, George Calvey, Andrea Katz, Yujie Chen, Max O Wiedorn, Juraj Knoska, Alke Meents, Valerio Majriani, Tyler Norwood, Ishwor Poudyal, Thomas Grant, Mitchell D Miller, Weijun Xu, Aleksandra Tolstikova, Andrew Morgan, Markus Metz, Jose M Martin-Garcia, James D Zook, Shatabdi Roy-Chowdhury, Jesse Coe, Nirupa Nagaratnam, Domingo Meza, Raimund Fromme, Shibom Basu, Matthias Frank, Thomas White, Anton Barty, Sasa Bajt, Oleksandr Yefanov, Henry N Chapman, Nadia Zatsepin, Garrett Nelson, Uwe Weierstall, John Spence, Peter Schwander, Lois Pollack, Petra Fromme, Abbas Ourmazd, George N Phillips Jr, Marius Schmidt Structural Dynamics 4, 044003 (2016); doi: http://dx.doi.org/10.1063/1.497206949. Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein
Pande, K., Hutchison, C. D. M., Groenhof, G., Aquila, A., Robinson, J. S., Tenboer, J., Basu, S., Boutet, S., DePonte, D. P., Liang, M., White, T. A., Zatsepin, N. A., Yefanov, O., Morozov, D., Oberthuer, D., Gati, C., Subramanian, G., James, D., Zhao, Y., Koralek, J., Brayshaw, J., Kupitz, C., Conrad, C., Roy-Chowdhury, S., Coe, J. D., Metz, M., Xavier, P. L., Grant, T. D., Koglin, J. E., Ketawala, G., Fromme, R., Srajer, V., Henning, R., Spence, J. C. H., Ourmazd, A., Schwander, P., Weierstall, U., Frank, M., Fromme, P., Barty, A., Chapman, H. N., Moffat, K., van Thor, J. J., and Schmidt, M. Science2016 May 6;352(6286):725-9. doi: 10.1126/science.aad5081. Epub 2016 May 5.48. Protein Crystallization in an Actuated Microfluidic Nanowell Device
Bahige G. Abdallah, Shatabdi Roy-Chowdhury, Raimund Fromme,Petra Fromme and Alexandra RosCrystal Growth & Design, 2016, 16 (4), pp 2074–2082
47. Macromolecular diffractive imaging using imperfect crystals
Kartik Ayyer, Oleksandr M. Yefanov, Dominik Oberthür, Shatabdi Roy-Chowdhury, Lorenzo Galli, Valerio Mariani, Shibom Basu, Jesse Coe, Chelsie E. Conrad, Raimund Fromme, Alexander Schaffer, Katerina Dörner, Daniel James, Christopher Kupitz, Markus Metz, Garrett Nelson, Paulraj Lourdu Xavier, Kenneth R. Beyerlein, Marius Schmidt, Iosifina Sarrou, John C. H. Spence, Uwe Weierstall,Thomas A. White,Jay-How Yang,Yun Zhao,Mengning Liang,Andrew Aquila, Mark S. Hunter, Joseph S. Robinson, Jason E. Koglin, Sébastien Boutet, Petra Fromme, Anton Barty& Henry N. Chapman Nature 530, 202–206 (11 February 2016) doi:10.1038/nature1694946. Ternary structure reveals mechanism of a membrane diacylglycerol kinase
Dianfan Li, Phillip J. Stansfeld, Mark S.P. Sansom, Aaron Keogh, Lutz Vogeley, Nicole Howe, Joseph A. Lyons, David Aragao, Petra Fromme, Raimund Fromme, Shibom Basu, Ingo Grotjohann, Christopher Kupitz, Kimberley Rendek, Uwe Weierstall, Nadia A. Zatsepin, Vadim Cherezov, Wei Liu, Sateesh Bandaru, Niall J. English, Cornelius Gati, Anton Barty, Oleksandr Yefanov, Henry N. Chapman, Kay Diederichs, Marc Messerschmidt, Sebastien Boutet, Garth J. Williams, M. Marvin Seibert & Martin Caffrey NATURE COMMUNICATIONS (2015)|6:10140|DOI: 10.1038/ncomms10140| Published 17 Dec 201545. Serial femtosecond crystallography of soluble proteins in lipidic cubic phase
Raimund Fromme, Andrii Ishchenko,Markus Metz, Shatabdi Roy Chowdhury, Shibom Basu, Sébastien Boutet, Petra Fromme, Thomas A. White, Anton Barty, John C. H. Spence, Uwe Weierstall, Wei Liu and Vadim Cherezov
IUCrJ, Volume 2, 5, September 2015, doi:10.1107/S205225251501316044. Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser
Kang Y, Zhou XE, Gao X, He Y, Liu W, Ishchenko A, Barty A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Ke J, Tan MH, Zhang C, Moeller A, West GM, Pascal BD, Van Eps N, Caro LN, Vishnivetskiy SA, Lee RJ, Suino-Powell KM, Gu X, Pal K, Ma J, Zhi X, Boutet S, Williams GJ, Messerschmidt M, Gati C, Zatsepin NA, Wang D, James D, Basu S, Roy-Chowdhury S, Conrad CE, Coe J, Liu H, Lisova S, Kupitz C, Grotjohann I, Fromme R, Jiang Y, Tan M, Yang H, Li J, Wang M, Zheng Z, Li D, Howe N, Zhao Y, Standfuss J, Diederichs K, Dong Y, Potter CS, Carragher B, Caffrey M, Jiang H, Chapman HN, Spence JC, Fromme P, Weierstall U, Ernst OP, Katritch V, Gurevich VV, Griffin PR, Hubbell WL, Stevens RC, Cherezov V, Melcher K, Xu HE
Nature (2015) doi:10.1038/nature14656, online 22 July 2015Jesse Coe, Christopher Kupitz, Shibom Basu, Chelsie E. Conrad, Shatabdi Roy-Chowdhury, Raimund Fromme, Petra Fromme
Methods Enzymol. 2015;557:459-82. doi: 10.1016/bs.mie.2015.01.011. Epub 2015 Apr 18.42. A novel inert crystal delivery medium for serial femtosecond crystallography
Chelsie E. Conrad, Shibom Basu, Daniel James, Dingjie Wang, Alexander Schaffer, Shatabdi Roy-Chowdhury, Nadia A. Zatsepin, Andrew Aquila, Jesse Coe, Cornelius Gati, Mark S. Hunter, Jason E. Koglin, Christopher Kupitz, Garrett Nelson, Ganesh Subramanian, Thomas A. White, Yun Zhao, James Zook, Sébastien Boutet, Vadim Cherezov, John C. H. Spence, Raimund Fromme, Uwe Weierstall, and Petra Fromme
IUCrJ Volume 2| Part 4| July 2015| Pages 421-430 ISSN: 2052-2525, doi:10.1107/S205225251500981141. Structural basis for bifunctional peptide recognition at human δ-opioid receptor
Gustavo Fenalti,Nadia A Zatsepin,Cecilia Betti,Patrick Giguere,Gye Won Han,Andrii Ishchenko,Wei Liu,Karel Guillemyn,Haitao Zhang,Daniel James,Dingjie Wang,Uwe Weierstall,John C H Spence,Sébastien Boutet,Marc Messerschmidt,Garth J Williams,Cornelius Gati,Oleksandr M Yefanov,Thomas A White,Dominik Oberthuer,Markus Metz,Chun Hong Yoon,Anton Barty,Henry N Chapman, Shibom Basu,Jesse Coe,Chelsie E Conrad,Raimund Fromme,Petra Fromme,Dirk Tourwé,Peter W Schiller, Bryan L Roth,Steven Ballet,Vsevolod Katritch,Raymond C Stevens & Vadim Cherezov
Nature Structural & Molecular Biology (2015) doi:10.1038/nsmb.2965
Hanseong Kim, Taisong Zou, Chintan Modi, Katerina Dörner, Timothy J. Grunkemeyer, Liqing Chen, Raimund Fromme, Mikhail V. Matz, S. Banu Ozkan and Rebekka M. Wachter
Structure 2015, Vol 23,1,34-43 doi:10.1016/j.str.2014.11.011
Jason Tenboer, Shibom Basu, Nadia Zatsepin, Kanupriya Pande, Despina Milathianaki, Matthias Frank, Mark Hunter, Sébastien Boutet, Garth J. Williams, Jason E. Koglin, Dominik Oberthuer, Michael Heymann, Christopher Kupitz, Chelsie Conrad, Jesse Coe,Shatabdi Roy-Chowdhury, Uwe Weierstall, Daniel James, Dingjie Wang, Thomas Grant,Anton Barty, Oleksandr Yefanov,Jennifer Scales, Cornelius Gati, Carolin Seuring, Vukica Srajer, Robert Henning, Peter Schwander, Raimund Fromme, Abbas Ourmazd, Keith Moffat, Jasper J. Van Thor, John C. H. Spence, Petra Fromme, Henry N. Chapman and Marius Schmidt
Science December 2014: 1242-1246. [DOI:10.1126/science.1259357]
Ho-Hsien Lee, Irene Cherni, HongQi Yu, Raimund Fromme, Jeffrey D. Doran, Ingo Grotjohann, Michele Mittman, Shibom Basu, Arpan Deb, Katerina Dörner, Andrew Aquila, Anton Barty, Sébastien Boutet, Henry N. Chapman, R. Bruce Doak, Mark S. Hunter, Daniel James, Richard A. Kirian, Christopher Kupitz, Robert M. Lawrence, Haiguang Liu, Karol Nass, Ilme Schlichting, Kevin E. Schmidt, M. Marvin Seibert, Robert L. Shoeman, John C. H. Spence, Francesco Stellato, Uwe Weierstall, Garth J. Williams, Chunhong Yoon, Dingjie Wang, Nadia A. Zatsepin, Brenda G. Hogue, Nobuyuki Matoba, Petra Fromme and Tsafrir S. Mor
IUCrJSep 1, 2014; 1(Pt 5): 305–317. Published online Aug 20, 2014. doi: 10.1107/S2052252514014900
37. Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser
David Arnlund, Linda C Johansson, Cecilia Wickstrand, Anton Barty, Garth J Williams, Erik Malmerberg, Jan Davidsson, Despina Milathianaki, Daniel P DePonte, Robert L Shoeman, Dingjie Wang, Daniel James, Gergely Katona, Sebastian Westenhoff, Thomas A White, Andrew Aquila,Sadia Bari, Peter Berntsen, Mike Bogan, Tim Brandt vanDriel,R Bruce Doak,Kasper SkovKjær, Matthias Frank, Raimund Fromme, Ingo Grotjohann, Robert Henning, Mark S Hunter, Richard A Kirian, Irina Kosheleva, Christopher Kupitz, Mengning Liang, Andrew V Martin, Martin Meedom Nielsen, Marc Messerschmidt, M Marvin Seibert, Jennie Sjöhamn, Francesco Stellato, Uwe Weierstall, Nadia A Zatsepin, John CH Spence, Petra Fromme, Ilme Schlichting, Sébastien Boutet, Gerrit Groenhof, Henry N Chapman & Richard Neutze
Nature Methods2014 Aug 10. doi: 10.1038/nmeth.3067. [Epub ahead of print]
36. Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser
Christopher Kupitz, Shibom Basu, Ingo Grotjohann, Raimund Fromme, Nadia A. Zatsepin, Kimberly N. Rendek, Mark S. Hunter, Robert L. Shoeman, Thomas A. White, Dingjie Wang, Daniel James, Jay-How Yang,Danielle E. Cobb,Brenda Reeder, Raymond G. Sierra, Haiguang Liu, Anton Barty, Andrew L. Aquila, Daniel Deponte, Richard A. Kirian,Sadia Bari, Jesse J. Bergkamp,Kenneth R. Beyerlein, Michael J. Bogan, Carl Caleman, Tzu-Chiao Chao,Chelsie E. Conrad, Katherine M. Davis, Holger Fleckenstein, Lorenzo Galli, Stefan P. Hau-Riege, Stephan Kassemeyer,Hartawan Laksmono, Mengning Liang, Lukas Lomb, Stefano Marchesini, Andrew V. Martin, Marc Messerschmidt Despina Milathianaki, Karol Nass, Alexandra Ros, Shatabdi Roy-Chowdhury, Kevin Schmidt, Marvin Seibert, Jan Steinbrener, Francesco Stellato, Lifen Yan, Chunhong Yoon, Thomas A. Moore, Ana L. Moore, Yulia Pushkar,Garth J. Williams, Sébastien Boutet, R. Bruce Doak, Uwe Weierstall, Matthias Frank, Henry N. Chapman,John C. H. Spence & Petra Fromme
Nature 2014 Jul 9 doi:10.1038/nature13453
Kupitz C, Grotjohann I, Conrad CE, Roy-Chowdhury S, Fromme R, Fromme P
Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647). pii: 20130316. doi: 10.1098/rstb.2013.0316.
34. Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography
Uwe Weierstall, Daniel James,Chong Wang,Thomas A. White, Dingjie Wang,Wei Liu,John C. H. Spence, R. Bruce Doak, Garrett Nelson, Petra Fromme, Raimund Fromme, Ingo Grotjohann, Christopher Kupitz, Nadia A. Zatsepin, Haiguang Liu,Shibom Basu,Daniel Wacker, Gye Won Han, Vsevolod Katritch, Sébastien Boutet, Marc Messerschmidt, Garth J. Williams, Jason E. Koglin,M. Marvin Seibert, Markus Klinker, Cornelius Gati,Robert L. Shoeman, Anton Barty,Henry N. Chapman,Richard A. Kirian, Kenneth R. Beyerlein, Raymond C. Stevens, Dianfan Li, Syed T. A. Shah, Nicole Howe, Martin Caffrey & Vadim Cherezov
Nat Commun. 2014 Feb 14;5:3309. doi: 10.1038/ncomms4309.
Domingo Meza-Aguilar J, Fromme P, Torres-Larios A, Mendoza-Hernández G, Hernandez-Chiñas U, Arreguin-Espinosa de Los Monteros RA, Eslava Campos CA, Fromme R.
Biochem Biophys Res Commun. 2014 Feb 12. pii: S0006-291X(14)00268-X. doi: 10.1016/j.bbrc.2014.02.016. [Epub ahead of print]
32. Serial Femtosecond Crystallography of G Protein–Coupled Receptors
Wei Liu, Daniel Wacker, Cornelius Gati, Gye Won Han, Daniel James, Dingjie Wang, Garrett Nelson, Uwe Weierstall, Vsevolod Katritch, Anton Barty, Nadia A. Zatsepin, Dianfan Li, Marc Messerschmidt, Sébastien Boutet, Garth J. Williams, Jason E. Koglin, M. Marvin Seibert, Chong Wang, Syed T. A. Shah, Shibom Basu, Raimund Fromme, Christopher Kupitz, Kimberley N. Rendek, Ingo Grotjohann, Petra Fromme, Richard A. Kirian, Kenneth R. Beyerlein, Thomas A. White, Henry N. Chapman, Martin Caffrey, John C. H. Spence, Raymond C. Stevens, and Vadim Cherezov
Science 20 December 2013: 1521-1524. [DOI:10.1126/science.1244142]
31. Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography
Linda C. Johansson, David Arnlund, Gergely Katona, Thomas A. White, Anton Barty, Daniel P. DePonte,Robert L. Shoeman, Cecilia Wickstrand, Amit Sharma, Garth J. Williams, Andrew Aquila, Michael J. Bogan, Carl Caleman, Jan Davidsson, R. Bruce Doak, Matthias Frank, Raimund Fromme, Lorenzo Galli, Ingo Grotjohann, Mark S. Hunter, Stephan Kassemeyer, Richard A. Kirian,Christopher Kupitz, Mengning Liang, Lukas Lomb, Erik Malmerberg, Andrew V. Martin, Marc Messerschmidt, Karol Nass, Lars Redecke, M. Marvin Seibert, Jennie Sjöhamn, Jan Steinbrener, Francesco Stellato, Dingjie Wang, Weixaio Y. Wahlgren, Uwe Weierstall, Sebastian Westenhoff, Nadia A. Zatsepin, Sébastien Boutet, John C.H. Spence, Ilme Schlichting, Henry N. Chapman, Petra Fromme & Richard Neutze
Nature Communications 2013,4,Article number: 2911 doi:10.1038/ncomms3911
Hanseong Kim, Timothy J Grunkemeyer, Chintan Modi, Liqing Chen, Raimund Fromme, Mikhail V Matz, Rebekka Maria Wachter.
Biochemistry, 2013, 52 (45), pp 8048–8059 DOI: 10.1021/bi401000e
29. The 1.6 Å resolution structure of a FRET-optimized Cerulean fluorescent protein.
Watkins JL, Kim H, Markwardt ML, Chen L, Fromme R, Rizzo MA, Wachter RM.
Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):767-73. doi: 10.1107/S0907444913001546. Epub 2013 Apr 11.
28. Crystallization of a self-assembled three-dimensional DNA nanostructure
Kimberly N. Rendek, Raimund Fromme, Ingo Grotjohann and Petra Fromme
Acta Cryst.(2013). F69, 141-146 [ doi:10.1107/S1744309112052128 ]
27. Natively Inhibited Trypanosoma brucei Cathepsin B Structure Determined by Using an X-ray Laser
Lars Redecke, Karol Nass, Daniel P. DePonte, Thomas A. White, Dirk Rehders, Anton Barty, Francesco Stellato, Mengning Liang, Thomas R.M. Barends, Sébastien Boutet, Garth J. Williams, Marc Messerschmidt, M. Marvin Seibert, Andrew Aquila, David Arnlund, Sasa Bajt, Torsten Barth, Michael J. Bogan, Carl Caleman, Tzu-Chiao Chao, R. Bruce Doak, Holger Fleckenstein, Matthias Frank, Raimund Fromme, Lorenzo Galli, Ingo Grotjohann, Mark S. Hunter, Linda C. Johansson, Stephan Kassemeyer, Gergely Katona, Richard A. Kirian, Rudolf Koopmann, Chris Kupitz, Lukas Lomb, Andrew V. Martin, Stefan Mogk, Richard Neutze, Robert L. Shoeman, Jan Steinbrener, Nicusor Timneanu, Dingjie Wang, Uwe Weierstall, Nadia A. Zatsepin, John C.H. Spence, Petra Fromme, Ilme Schlichting, Michael Duszenko, Christian Betzel, and Henry N. Chapman
SciencePublished online 29 November 2012 [DOI:10.1126/science.1229663]
26. Improving the Accuracy of Macromolecular Structure Refinement at 7 Å Resolution
Axel T. Brunger, Paul D. Adams, Petra Fromme, Raimund Fromme, Michael Levitt, Gunnar F. Schröder
Structure Volume 20, Issue 6, 6 June 2012, Pages 957–966,[doi:10.1016/j.str.2012.04.020]
25. High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography.
Boutet S, Lomb L, Williams GJ, Barends TR, Aquila A, Doak RB, Weierstall U, Deponte DP, Steinbrener J, Shoeman RL, Messerschmidt M, Barty A, White TA, Kassemeyer S, Kirian RA, Seibert MM, Montanez PA, Kenney C, Herbst R, Hart P, Pines J, Haller G, Gruner SM, Philipp HT, Tate MW, Hromalik M, Koerner LJ, van Bakel N, Morse J, Ghonsalves W, Arnlund D, Bogan MJ, Caleman C, Fromme R, Hampton CY, Hunter MS, Johansson L, Katona G, Kupitz C, Liang M, Martin AV, Nass K, Redecke L, Stellato F, Timneanu N, Wang D, Zatsepin NA, Schafer D, Defever J, Neutze R, Fromme P, Spence JC, Chapman HN, Schlichting I.
Science (2012)Jul 20;337(6092):362-4. [doi: 10.1126/science.1217737]
24. Time-resolved protein nanocrystallography using an X-ray free-electron laser.
Aquila A, Hunter MS, Doak RB, Kirian RA, Fromme P, White TA, Andreasson J, Arnlund D, Bajt S, Barends TR, Barthelmess M, Bogan MJ, Bostedt C, Bottin H, Bozek JD, Caleman C, Coppola N, Davidsson J, DePonte DP, Elser V, Epp SW, Erk B, Fleckenstein H, Foucar L, Frank M, Fromme R, Graafsma H, Grotjohann I, Gumprecht L, Hajdu J, Hampton CY, Hartmann A, Hartmann R, Hau-Riege S, Hauser G, Hirsemann H, Holl P, Holton JM, Hömke A, Johansson L, Kimmel N, Kassemeyer S, Krasniqi F, Kühnel KU, Liang M, Lomb L, Malmerberg E, Marchesini S, Martin AV, Maia FR, Messerschmidt M, Nass K, Reich C, Neutze R, Rolles D, Rudek B, Rudenko A, Schlichting I, Schmidt C, Schmidt KE, Schulz J, Seibert MM, Shoeman RL, Sierra R, Soltau H, Starodub D, Stellato F, Stern S, Strüder L, Timneanu N, Ullrich J, Wang X, Williams GJ, Weidenspointner G, Weierstall U, Wunderer C, Barty A, Spence JC, Chapman HN.
Opt Express. 2012 Jan 30;20(3):2706-16. doi: 10.1364/OE.20.002706.
Henderson, J.N., Kuriata, A.M., Fromme, R., Salvucci, M.E. & Wachter, R.M.
Journal of Biological Chemistry, 2011 vol. 286, no. 41, pp. 35683-35688. [doi: 10.1074/jbc.C111.289595]
22. Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals
Kirian RA, White TA, Holton JM, Chapman HN, Fromme P, Barty A, Lomb L, Aquila A, Maia FR, Martin AV, Fromme R, Wang X, Hunter MS, Schmidt KE, Spence JC
Acta Crystallogr A . 2011 Mar;67(Pt 2):131-40. Epub 2011 Feb 16,[ doi: 10.1107/S0108767310050981]
21. Femtosecond X-Ray Protein Nanocrystallography.
Chapman, H. N., Fromme, P., Barty, A., White, T. A., Kirian, R. A., Aquila, A., Hunter, M. S., Schulz, J., DePonte, D. P., Weierstall, U., Doak, R. B., Maia, F. R. N. C., Martin, A. V., Schlichting, I., Lomb, L., Coppola, N., Shoeman, R. L., Epp, S. W., Hartmann, R., Rolles, D., Rudenko, A., Foucar, L., Kimmel, N., Weidenspointner, G., Holl, P., Liang, M., Barthelmess, M., Caleman, C., Boutet, S., Bogan, M. J., Krzywinski, J., Bostedt, C., Bajt, S., Gumprecht, L., Rudek, B., Erk, B., Schmidt, C., Hoemke, A., Reich, C., Pietschner, D., Strueder, L., Hauser, G., Gorke, H., Ullrich, J., Herrmann, S., Schaller, G., Schopper, F., Soltau, H., Kuehnel, K., Messerschmidt, M., Bozek, J. D., Hau-Riege, S. P., Frank, M., Hampton, C. Y., Sierra, R. G., Starodub, D., Williams, G. J., Hajdu, J., Timneanu, N., Seibert, M. M., Andreasson, J., Rocker, A., Joensson, O., Svenda, M., Stern, S., Nass, K., Andritschke, R., Schroeter, C., Krasniqi, F., Bott, M., Schmidt, K. E., Wang, X., Grotjohann, I., Holton, J. M., Barends, T. R. M., Neutze, R., Marchesini, S., Fromme, R., Schorb, S., Rupp, D., Adolph, M., Gorkhover, T., Andersson, I., Hirsemann, H., Potdevin, G., Graafsma, H., Nilsson, B., and Spence, J. C. H.
Nature (2011) 470 , 73-77,[doi: 10.1038/nature09750]
Yueyong Xin, Yih-Kuang Lu, Raimund Fromme, Petra Fromme and Robert E. Blankenship
Biochimica et Biophysica Acta(BBA) - Bioenergetics(2009),Volume 1787, pp. 86-96,[doi:10.1016/j.bbabio.2008.11.010]
19. Photosynthetic protein complexes, Editor: P.Fromme, Ferredoxin and Flavodoxin mediated Electron Transfer in Photosystem I. Raimund Fromme(2008)in: Bookchapter. Wiley-VCH, Weinheim, pp. 341-352[DOI: 10.1002/9783527623464.ch15]
18. Crystallization of the c14-rotor of the chloroplast ATP synthase reveals that it contains pigments
Benjamin Varco-Merth, Raimund Fromme, Meitian Wang and Petra Fromme
Biochimica et Biophysica Acta (BBA) - Bioenergetics,(2008) Volume 1777, Issues 7-8, Pages 605-612[doi:10.1016/j.bbabio.2008.05.009]
Raimund Fromme, Zivile Katiliene, Petra Fromme, Giovanna Ghirlanda
Protein Science 17: 939-944[DOI: 10.1110/ps.083472808]
Fromme, R. Katilene,Z. Giomarelli,B. Bogani, F. McMahon, J. Mori, T. , Fromme, P. Ghirlanda, G
BIOCHEMISTRY (2007)46, 9199-9207,DOI: 10.1021/bi700666m15. Microsecond Time Scale Rotation Measurements of Single F1-ATPase Molecules
Spetzler, D., York, J., Daniel, D. ,Fromme, R., Lowry, D. & Frasch ,WBIOCHEMISTRY (2006) 45 (10): 3117-3124[DOI: 10.1021/bi052363n]
14. Fromme R, Yu H, Fromme P.(2005)Cocrystals of photosystem I with its soluble natural electron acceptor ferredoxin at 4 A resolution. FEBS JOURNAL 272, 449
13. Fromme P, Yu H, Bukman Y, Ni D, Varco-Merth B, Chauhan D, Vanselow C, Jolley C, Fromme R, Grotjohann ,(2005) New Insigths into the structure and function of photosystem I and II. FEBS JOURNAL 272, 451
12. Structure and Function of Photosystem I
Fromme, R., Grotjohann, I.,&Fromme, P (2007)Structure and function of Photosystem I. Editor G. RengerRoyal Society of Chemistry (Cambridge, UK) 111-146,DOI:10.1039/9781847558169-00111
11. Fromme, R., Grotjohann, I.,&Fromme, P (2006) Primary Processes in Photosynthesis. Editor R. Grisshammer and S. Buchanan. Royal Society of Chemistry (Cambridge, UK) ISBN 0 85404 361 6, Bookchapter. pp. 320-348 Structure of Photosystems I and II
10. Fromme, Raimund(1994) Untersuchungen zur Struktur und Funktion des Photosystems II der Photosynthese aus Höheren Pflanzen und Algen, Verlag Dr. Köster Berlin, ISBN 3-89574-030-6, 159 pages
9. Fromme, R., Hohm-Veit, S., & Renger, G. (1992). Stabilization of Photosystem II with BSA and Immobilization with Alginate. Research in Photosynthesis (Murata, N. ed.)Vol. 2, pp.183-186 Kluwer, Dordrecht
8. Fromme, R., & Renger, G. (1990). Studies on Herbicide Binding in Photosystem II Membrane Fragments from Spinach. Z. Naturforsch., 45 c, 373-378
7. Gleiter, H. M., Ohad, N., Hirschberg, J.,Fromme, R., Renger, G., Koike, H., & Inoue, Y. (1990). An Application of Thermoluminescence to Herbicide Studies. Z. Naturforsch., 45 c, 353-358
6. Schmid, R., Fromme, R., & Renger, G. (1990). The photosynthetic apparatus of Acetabularia mediterranea grown under red and blue light. Biophysical quantification and characterization of Photosystem II and its core components. Photochem. Photobiol., 52, 103-109
5. Renger, G., Messinger, J., & Fromme, R. (1989). Tribromotoluquinone Induced Modification of the Oscillation Pattern of Oxygen Evolution and of Herbicide Binding in Thylakoids and PS 2 Membrane Fragments from Spinach. Z. Naturforsch., 44 c, 423-430
4. Renger, G., Völker, M., Eckert, H.-J., Fromme, R., Hohm-Veit, S., & Gräber, P. (1989). On the mechanism of Photosystem II deterioration by UV-B irradiation. Photochem. Photobiol., 49(1), 97-105
3. Renger, G., Fromme, R., & Hagemann, R. (1988). The modification of atrazine binding by the redox state of the endogenous high-spin iron and by specific proteolytic enzymes in Photosystem membrane fragments and intact thylakoids. Biochim. Biophys. Acta, 935, 173-183
2. Fromme, R., Hagemann, R., & Renger, G. (1987). Comparative Studies of Electron transport and atrazine binding in thylakoids and PS II particles from spinach. In J. Biggens (Ed.), Progress in Photosynthesis Research (Vol. III, pp. 783-786). Dordrecht:Martinus Nijhoff Publishers
Renger, G., Hagemann, R., Fromme R. (1986) FEBS Lett., 203,2, 210-213[doi:10.1016/0014-5793(86)80744-X]
Ars longa, vita brevis